Cluster: Rep_769_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_769_c_0 | Rep_769_c_0_95 | 109684 | 110304 | + | 8.A.5.1.4 |
| pfam | Rep_769_c_0 | Rep_769_c_0_96 | 110196 | 111062 | - | Aldose_epim |
| TC | Rep_769_c_0 | Rep_769_c_0_97 | 111222 | 113486 | - | 1.B.12.2.3 |
| TC | Rep_769_c_0 | Rep_769_c_0_98 | 113687 | 115000 | + | 9.A.40.2.2 |
| NULL(UNKNOWN) | Rep_769_c_0 | Rep_769_c_0_99 | 115109 | 115492 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_769_c_0 | Rep_769_c_0_100 | 115515 | 117776 | - | GT51 |
Gene ID: Rep_769_c_0_95
Type: TC
Location: 109684 - 110304 (+)
Type: TC
Location: 109684 - 110304 (+)
Gene ID: Rep_769_c_0_96
Type: pfam
Location: 110196 - 111062 (-)
Type: pfam
Location: 110196 - 111062 (-)
Gene ID: Rep_769_c_0_97
Type: TC
Location: 111222 - 113486 (-)
Type: TC
Location: 111222 - 113486 (-)
Gene ID: Rep_769_c_0_98
Type: TC
Location: 113687 - 115000 (+)
Type: TC
Location: 113687 - 115000 (+)
Gene ID: Rep_769_c_0_99
Type:
Location: 115109 - 115492 (+)
Type:
Location: 115109 - 115492 (+)
Gene ID: Rep_769_c_0_100
Type: CAZyme
Location: 115515 - 117776 (-)
Type: CAZyme
Location: 115515 - 117776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.