Cluster: Rep_769_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_769_c_0 | Rep_769_c_0_1734 | 1795253 | 1796449 | - | 2.A.3.6.4 |
| pfam | Rep_769_c_0 | Rep_769_c_0_1735 | 1796543 | 1797301 | - | DUF1796 |
| NULL(UNKNOWN) | Rep_769_c_0 | Rep_769_c_0_1736 | 1797301 | 1797621 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_769_c_0 | Rep_769_c_0_1737 | 1797687 | 1798274 | - | GT2 |
Gene ID: Rep_769_c_0_1734
Type: TC
Location: 1795253 - 1796449 (-)
Type: TC
Location: 1795253 - 1796449 (-)
Gene ID: Rep_769_c_0_1735
Type: pfam
Location: 1796543 - 1797301 (-)
Type: pfam
Location: 1796543 - 1797301 (-)
Gene ID: Rep_769_c_0_1736
Type:
Location: 1797301 - 1797621 (-)
Type:
Location: 1797301 - 1797621 (-)
Gene ID: Rep_769_c_0_1737
Type: CAZyme
Location: 1797687 - 1798274 (-)
Type: CAZyme
Location: 1797687 - 1798274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.