Cluster: Rep_769_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_769_c_0 | Rep_769_c_0_1702 | 1760648 | 1761910 | + | GT30 |
| pfam | Rep_769_c_0 | Rep_769_c_0_1703 | 1761912 | 1762862 | + | LpxK |
| TC | Rep_769_c_0 | Rep_769_c_0_1704 | 1762859 | 1763788 | - | 8.A.5.1.4 |
Gene ID: Rep_769_c_0_1702
Type: CAZyme
Location: 1760648 - 1761910 (+)
Type: CAZyme
Location: 1760648 - 1761910 (+)
Gene ID: Rep_769_c_0_1703
Type: pfam
Location: 1761912 - 1762862 (+)
Type: pfam
Location: 1761912 - 1762862 (+)
Gene ID: Rep_769_c_0_1704
Type: TC
Location: 1762859 - 1763788 (-)
Type: TC
Location: 1762859 - 1763788 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.