Cluster: Rep_769_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_769
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_769_c_0 | Rep_769_c_0_1235 | 1285435 | 1286625 | + | GT19 |
| NULL(UNKNOWN) | Rep_769_c_0 | Rep_769_c_0_1236 | 1286678 | 1286929 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_769_c_0 | Rep_769_c_0_1237 | 1287040 | 1289085 | + | 3.A.11.1.3 |
Gene ID: Rep_769_c_0_1235
Type: CAZyme
Location: 1285435 - 1286625 (+)
Type: CAZyme
Location: 1285435 - 1286625 (+)
Gene ID: Rep_769_c_0_1236
Type:
Location: 1286678 - 1286929 (-)
Type:
Location: 1286678 - 1286929 (-)
Gene ID: Rep_769_c_0_1237
Type: TC
Location: 1287040 - 1289085 (+)
Type: TC
Location: 1287040 - 1289085 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp000432275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.