Cluster: Rep_719_CGC27
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_719
- CGC Family ID: CGCFAM_00006
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_719_c_11 | Rep_719_c_11_18 | 28198 | 30348 | - | 2.A.16.2.2 |
| CAZyme | Rep_719_c_11 | Rep_719_c_11_19 | 31706 | 33670 | - | GH29 |
| pfam | Rep_719_c_11 | Rep_719_c_11_20 | 34116 | 35258 | - | Acyl_transf_3 |
| pfam | Rep_719_c_11 | Rep_719_c_11_21 | 35283 | 36374 | - | CTP_transf_like |
| CAZyme | Rep_719_c_11 | Rep_719_c_11_22 | 36424 | 37605 | - | GT26 |
| CAZyme | Rep_719_c_11 | Rep_719_c_11_23 | 37568 | 38815 | - | GT4 |
| pfam | Rep_719_c_11 | Rep_719_c_11_24 | 38823 | 39392 | - | Hexapep | Hexapep_2 |
| CAZyme | Rep_719_c_11 | Rep_719_c_11_25 | 39389 | 40498 | - | GT4 |
| NULL(UNKNOWN) | Rep_719_c_11 | Rep_719_c_11_26 | 40502 | 41362 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_719_c_11 | Rep_719_c_11_27 | 41344 | 42192 | - | GT2 |
| NULL(UNKNOWN) | Rep_719_c_11 | Rep_719_c_11_28 | 42189 | 43442 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_719_c_11 | Rep_719_c_11_29 | 43510 | 44175 | - | Hexapep | Hexapep_2 |
| CAZyme | Rep_719_c_11 | Rep_719_c_11_30 | 44163 | 45494 | - | GT4 |
Gene ID: Rep_719_c_11_18
Type: TC
Location: 28198 - 30348 (-)
Type: TC
Location: 28198 - 30348 (-)
Gene ID: Rep_719_c_11_19
Type: CAZyme
Location: 31706 - 33670 (-)
Type: CAZyme
Location: 31706 - 33670 (-)
Gene ID: Rep_719_c_11_20
Type: pfam
Location: 34116 - 35258 (-)
Type: pfam
Location: 34116 - 35258 (-)
Gene ID: Rep_719_c_11_21
Type: pfam
Location: 35283 - 36374 (-)
Type: pfam
Location: 35283 - 36374 (-)
Gene ID: Rep_719_c_11_22
Type: CAZyme
Location: 36424 - 37605 (-)
Type: CAZyme
Location: 36424 - 37605 (-)
Gene ID: Rep_719_c_11_23
Type: CAZyme
Location: 37568 - 38815 (-)
Type: CAZyme
Location: 37568 - 38815 (-)
Gene ID: Rep_719_c_11_24
Type: pfam
Location: 38823 - 39392 (-)
Type: pfam
Location: 38823 - 39392 (-)
Gene ID: Rep_719_c_11_25
Type: CAZyme
Location: 39389 - 40498 (-)
Type: CAZyme
Location: 39389 - 40498 (-)
Gene ID: Rep_719_c_11_26
Type:
Location: 40502 - 41362 (-)
Type:
Location: 40502 - 41362 (-)
Gene ID: Rep_719_c_11_27
Type: CAZyme
Location: 41344 - 42192 (-)
Type: CAZyme
Location: 41344 - 42192 (-)
Gene ID: Rep_719_c_11_28
Type:
Location: 42189 - 43442 (-)
Type:
Location: 42189 - 43442 (-)
Gene ID: Rep_719_c_11_29
Type: pfam
Location: 43510 - 44175 (-)
Type: pfam
Location: 43510 - 44175 (-)
Gene ID: Rep_719_c_11_30
Type: CAZyme
Location: 44163 - 45494 (-)
Type: CAZyme
Location: 44163 - 45494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia biwaensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.