PROTEIN: Rep_719_c_11_26
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Protein File & Metadata
Source:
Rep_719_c_11_26.pdb
Genome ID:
Protein ID:
Rep_719_c_11_26
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Detailed structural information will appear here after analysis...
Protein Sequence
MDKNEIDWIF QIDDEEVLET YRTRDNYLIE HSPEGDGSRC AVYFSSNDLY FPNNRARFHE 60 RVTRRNTFEW FGTRIPGCGR HIFIRDVFKQ WYLGGINARL NSPEKVLEWL KEETRGCRVT 120 MMGSSAGGYA AVLFGSLLHA ERVFSFNGYF DLAPETDMEN AAVVNPLLVR YRNDVQRAPF 180 YRLAPFLRER TPVYYFHSLF SPIDRRQREL LGNHQGVHVI PFRSSRHGIP FLKCCLNRIF 240 QYSDEKLLAL CGTEHHPVRF SLRCAGVWET AAGFSRQVWQ HYRKRH 286
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G154-F1-model_v4 | 21 | 247 | 12 | 272 | 0.5756 |
0.7218 |
| AF-A0A1D8PU91-F1-model_v4 | 1 | 247 | 18 | 290 | 0.57 |
0.6858 |
| AF-Q18974-F1-model_v4 | 21 | 247 | 52 | 271 | 0.5687 |
0.7278 |
| AF-A0A0K0E2A5-F1-model_v4 | 24 | 246 | 56 | 270 | 0.5594 |
0.7291 |
| AF-Q556N4-F1-model_v4 | 1 | 286 | 131 | 480 | 0.4631 |
0.6271 |
| AF-A0A1D6K3R1-F1-model_v4 | 4 | 285 | 1 | 343 | 0.4568 |
0.6225 |
| AF-A0A0R0F6S0-F1-model_v4 | 4 | 285 | 1 | 347 | 0.4521 |
0.6297 |
| AF-A0A175VXG7-F1-model_v4 | 4 | 247 | 180 | 653 | 0.4342 |
0.6994 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-L0J8T0-F1-model_v4 | CE1 | 21 | 246 | 40 | 293 | 0.5738 |
0.7435 |
| AF-A0A1H6JEN2-F1-model_v4 | CE1 | 21 | 245 | 41 | 292 | 0.5732 |
0.7455 |
| AF-A0A516NYA8-F1-model_v4 | CE1 | 21 | 246 | 47 | 316 | 0.5569 |
0.7463 |
| AF-A0A1X0BLP9-F1-model_v4 | CE1 | 21 | 247 | 37 | 304 | 0.5561 |
0.7327 |
| AF-A0A7G1KBZ3-F1-model_v4 | CE1 | 21 | 247 | 59 | 329 | 0.5544 |
0.7506 |
| AF-A0A4V1BH76-F1-model_v4 | CE1 | 21 | 247 | 61 | 334 | 0.5492 |
0.747 |
| A0A506ULY6 | CBM47 | 21 | 286 | 27 | 415 | 0.5135 |
0.6814 |
| AF-A0A6I6IM69-F1-model_v4 | GT0 | 20 | 286 | 33 | 611 | 0.475 |
0.7206 |
| AF-A0A4Y5SSC8-F1-model_v4 | GT0 | 1 | 271 | 172 | 697 | 0.4696 |
0.7078 |
| AF-A0A6G6FMK5-F1-model_v4 | GT0 | 20 | 286 | 31 | 610 | 0.4657 |
0.7034 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4V1BH76 | CE1 | 21 | 247 | 61 | 334 | 0.5492 |
0.747 |
| A0A506ULY6 | CBM47 | 21 | 286 | 27 | 415 | 0.5135 |
0.6814 |
| A0A6L7GTX5 | CE1 | 21 | 245 | 94 | 363 | 0.4604 |
0.7361 |
| A0A2K9MCY3 | GT32 | 7 | 261 | 412 | 687 | 0.4539 |
0.7326 |
| A0A0K2H2I8 | CE1 | 10 | 247 | 132 | 453 | 0.4171 |
0.7138 |
| A0A6S6P4J2 | CE1 | 16 | 246 | 17 | 306 | 0.4121 |
0.7258 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6yuo-assembly1.cif.gz_A-2 | 20 | 243 | 17 | 241 | 0.609 |
0.7281 |
| 1r88-assembly2.cif.gz_B | 21 | 245 | 14 | 264 | 0.5998 |
0.7478 |
| 2uz0-assembly1.cif.gz_B | 21 | 271 | 17 | 252 | 0.593 |
0.6925 |
| 2uz0-assembly1.cif.gz_C | 21 | 265 | 17 | 249 | 0.5892 |
0.6917 |
| 3h04-assembly1.cif.gz_A | 21 | 247 | 10 | 270 | 0.5796 |
0.7231 |
| 5cml-assembly1.cif.gz_A | 22 | 247 | 13 | 238 | 0.5689 |
0.6775 |
| 4ouk-assembly1.cif.gz_X | 4 | 247 | 1 | 299 | 0.5646 |
0.7001 |
| 2xmz-assembly1.cif.gz_A | 24 | 247 | 1 | 264 | 0.5643 |
0.7061 |
| 4n5h-assembly1.cif.gz_X | 2 | 247 | 1 | 304 | 0.5617 |
0.6961 |
| 3o4g-assembly1.cif.gz_B | 7 | 246 | 165 | 573 | 0.4385 |
0.6865 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.