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Cluster: Rep_625_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_625_c_149 Rep_625_c_149_2 400 1314 + 3.D.1.9.3
NULL(UNKNOWN) Rep_625_c_149 Rep_625_c_149_3 1311 1940 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_625_c_149 Rep_625_c_149_4 1945 3345 + 3.D.1.9.1
TC Rep_625_c_149 Rep_625_c_149_5 3342 4871 + 3.D.1.9.3
CAZyme Rep_625_c_149 Rep_625_c_149_6 5150 6274 + CE8
TC Rep_625_c_149 Rep_625_c_149_7 6556 7320 + 3.D.1.4.3
TC Rep_625_c_149 Rep_625_c_149_8 7325 7888 + 2.A.51.1.6
NULL(UNKNOWN) Rep_625_c_149 Rep_625_c_149_9 7885 8355 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_625_c_149 Rep_625_c_149_10 8368 8949 + 2.A.51.1.6
Gene ID: Rep_625_c_149_2
Type: TC
Location: 400 - 1314 (+)
Gene ID: Rep_625_c_149_3
Type:
Location: 1311 - 1940 (+)
Gene ID: Rep_625_c_149_4
Type: TC
Location: 1945 - 3345 (+)
Gene ID: Rep_625_c_149_5
Type: TC
Location: 3342 - 4871 (+)
Gene ID: Rep_625_c_149_6
Type: CAZyme
Location: 5150 - 6274 (+)
Gene ID: Rep_625_c_149_7
Type: TC
Location: 6556 - 7320 (+)
Gene ID: Rep_625_c_149_8
Type: TC
Location: 7325 - 7888 (+)
Gene ID: Rep_625_c_149_9
Type:
Location: 7885 - 8355 (+)
Gene ID: Rep_625_c_149_10
Type: TC
Location: 8368 - 8949 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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