dbCAN Logo

Cluster: Rep_625_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_625_c_136 Rep_625_c_136_3 1925 2956 - GT9
pfam Rep_625_c_136 Rep_625_c_136_4 2940 3545 - DUF4254
CAZyme Rep_625_c_136 Rep_625_c_136_5 3632 4636 + GH73
NULL(UNKNOWN) Rep_625_c_136 Rep_625_c_136_6 4811 5497 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_625_c_136 Rep_625_c_136_7 5535 7697 + 8.A.51.1.1
pfam Rep_625_c_136 Rep_625_c_136_8 7703 8371 + DNA_binding_1
CAZyme Rep_625_c_136 Rep_625_c_136_9 8445 9971 - GT22
TC Rep_625_c_136 Rep_625_c_136_10 10105 11532 - 3.D.1.2.1
TC Rep_625_c_136 Rep_625_c_136_11 11540 12259 - 3.D.1.2.1
Gene ID: Rep_625_c_136_3
Type: CAZyme
Location: 1925 - 2956 (-)
Gene ID: Rep_625_c_136_4
Type: pfam
Location: 2940 - 3545 (-)
Gene ID: Rep_625_c_136_5
Type: CAZyme
Location: 3632 - 4636 (+)
Gene ID: Rep_625_c_136_6
Type:
Location: 4811 - 5497 (+)
Gene ID: Rep_625_c_136_7
Type: TC
Location: 5535 - 7697 (+)
Gene ID: Rep_625_c_136_8
Type: pfam
Location: 7703 - 8371 (+)
Gene ID: Rep_625_c_136_9
Type: CAZyme
Location: 8445 - 9971 (-)
Gene ID: Rep_625_c_136_10
Type: TC
Location: 10105 - 11532 (-)
Gene ID: Rep_625_c_136_11
Type: TC
Location: 11540 - 12259 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List