Cluster: Rep_625_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_625
- CGC Family ID: CGCFAM_01981
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_625_c_88 | Rep_625_c_88_1 | 103 | 1290 | - | 2.A.1.7.16 |
| sulfatase | Rep_625_c_88 | Rep_625_c_88_2 | 1287 | 2390 | - | S1_7 |
| NULL(UNKNOWN) | Rep_625_c_88 | Rep_625_c_88_3 | 2429 | 4156 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_625_c_88 | Rep_625_c_88_4 | 4217 | 6568 | - | GH92 |
Gene ID: Rep_625_c_88_1
Type: TC
Location: 103 - 1290 (-)
Type: TC
Location: 103 - 1290 (-)
Gene ID: Rep_625_c_88_2
Type: sulfatase
Location: 1287 - 2390 (-)
Type: sulfatase
Location: 1287 - 2390 (-)
Gene ID: Rep_625_c_88_3
Type:
Location: 2429 - 4156 (-)
Type:
Location: 2429 - 4156 (-)
Gene ID: Rep_625_c_88_4
Type: CAZyme
Location: 4217 - 6568 (-)
Type: CAZyme
Location: 4217 - 6568 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.