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Cluster: Rep_623_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_623_c_58 Rep_623_c_58_31 42581 43930 - GH171
pfam Rep_623_c_58 Rep_623_c_58_32 44042 45154 - RF-1 | PCRF
TC Rep_623_c_58 Rep_623_c_58_33 45160 45795 - 2.A.115.2.14
TC Rep_623_c_58 Rep_623_c_58_34 45800 47173 - 2.A.66.1.32
pfam Rep_623_c_58 Rep_623_c_58_35 47353 48828 - tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C
pfam Rep_623_c_58 Rep_623_c_58_36 49064 52288 + TMEM260-like
TC Rep_623_c_58 Rep_623_c_58_37 52417 54126 - 4.C.1.1.14
pfam Rep_623_c_58 Rep_623_c_58_38 54264 55199 + QueG_DUF1730 | Fer4_16
TC Rep_623_c_58 Rep_623_c_58_39 55165 56508 - 2.A.66.1.32
Gene ID: Rep_623_c_58_31
Type: CAZyme
Location: 42581 - 43930 (-)
Gene ID: Rep_623_c_58_32
Type: pfam
Location: 44042 - 45154 (-)
Gene ID: Rep_623_c_58_33
Type: TC
Location: 45160 - 45795 (-)
Gene ID: Rep_623_c_58_34
Type: TC
Location: 45800 - 47173 (-)
Gene ID: Rep_623_c_58_35
Type: pfam
Location: 47353 - 48828 (-)
Gene ID: Rep_623_c_58_36
Type: pfam
Location: 49064 - 52288 (+)
Gene ID: Rep_623_c_58_37
Type: TC
Location: 52417 - 54126 (-)
Gene ID: Rep_623_c_58_38
Type: pfam
Location: 54264 - 55199 (+)
Gene ID: Rep_623_c_58_39
Type: TC
Location: 55165 - 56508 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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