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Cluster: Rep_623_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_623_c_45 Rep_623_c_45_53 65836 66999 - 2.A.1.7.16
TC Rep_623_c_45 Rep_623_c_45_54 67375 69435 + 2.A.37.2.5
pfam Rep_623_c_45 Rep_623_c_45_55 69638 70942 + GTP_EFTU | MMR_HSR1 | MMR_HSR1 | FeoB_N | FeoB_N | AIG1 | KH_dom-like
pfam Rep_623_c_45 Rep_623_c_45_56 71197 71649 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme Rep_623_c_45 Rep_623_c_45_57 71757 74309 - GH84
TC Rep_623_c_45 Rep_623_c_45_58 74429 75946 - 3.A.18.1.1
pfam Rep_623_c_45 Rep_623_c_45_59 76046 77422 - UPF0004 | TRAM | Radical_SAM
TC Rep_623_c_45 Rep_623_c_45_60 77458 78447 - 2.A.115.1.2
TC Rep_623_c_45 Rep_623_c_45_61 78592 79263 + 9.B.31.1.2
Gene ID: Rep_623_c_45_53
Type: TC
Location: 65836 - 66999 (-)
Gene ID: Rep_623_c_45_54
Type: TC
Location: 67375 - 69435 (+)
Gene ID: Rep_623_c_45_55
Type: pfam
Location: 69638 - 70942 (+)
Gene ID: Rep_623_c_45_56
Type: pfam
Location: 71197 - 71649 (+)
Gene ID: Rep_623_c_45_57
Type: CAZyme
Location: 71757 - 74309 (-)
Gene ID: Rep_623_c_45_58
Type: TC
Location: 74429 - 75946 (-)
Gene ID: Rep_623_c_45_59
Type: pfam
Location: 76046 - 77422 (-)
Gene ID: Rep_623_c_45_60
Type: TC
Location: 77458 - 78447 (-)
Gene ID: Rep_623_c_45_61
Type: TC
Location: 78592 - 79263 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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