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Cluster: Rep_623_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_623_c_35 Rep_623_c_35_43 53543 56902 + 1.B.14.6.13
TC Rep_623_c_35 Rep_623_c_35_44 56916 58499 + 8.A.46.2.2
CAZyme Rep_623_c_35 Rep_623_c_35_45 58524 60929 + GH18
pfam Rep_623_c_35 Rep_623_c_35_46 60959 62116 + BT_3987-like_N | Laminin_G_3
CAZyme Rep_623_c_35 Rep_623_c_35_47 62316 64364 + GH20
pfam Rep_623_c_35 Rep_623_c_35_48 64544 65278 + ArAE_1 | FUSC_2
pfam Rep_623_c_35 Rep_623_c_35_49 66008 67042 - VWA | BatA | VWA_2
TC Rep_623_c_35 Rep_623_c_35_50 67199 68185 - 1.A.13.4.1
Gene ID: Rep_623_c_35_43
Type: TC
Location: 53543 - 56902 (+)
Gene ID: Rep_623_c_35_44
Type: TC
Location: 56916 - 58499 (+)
Gene ID: Rep_623_c_35_45
Type: CAZyme
Location: 58524 - 60929 (+)
Gene ID: Rep_623_c_35_46
Type: pfam
Location: 60959 - 62116 (+)
Gene ID: Rep_623_c_35_47
Type: CAZyme
Location: 62316 - 64364 (+)
Gene ID: Rep_623_c_35_48
Type: pfam
Location: 64544 - 65278 (+)
Gene ID: Rep_623_c_35_49
Type: pfam
Location: 66008 - 67042 (-)
Gene ID: Rep_623_c_35_50
Type: TC
Location: 67199 - 68185 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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