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Cluster: Rep_623_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_623_c_15 Rep_623_c_15_59 59568 60905 + 2.A.62.1.3
pfam Rep_623_c_15 Rep_623_c_15_60 60994 61368 - 4HBT | FlK
pfam Rep_623_c_15 Rep_623_c_15_61 61529 62119 + DUF4294
TC Rep_623_c_15 Rep_623_c_15_62 62419 63753 + 3.A.5.1.1
pfam Rep_623_c_15 Rep_623_c_15_63 64840 65721 + GTP_EFTU | MMR_HSR1 | FeoB_N | KH_2 | PduV-EutP
STP Rep_623_c_15 Rep_623_c_15_64 65821 67812 + TPR_1 | TPR_1 | TPR_1 | TPR_1
TC Rep_623_c_15 Rep_623_c_15_65 67840 69210 + 2.A.1.53.5
CAZyme Rep_623_c_15 Rep_623_c_15_66 69355 70500 - GT4
Gene ID: Rep_623_c_15_59
Type: TC
Location: 59568 - 60905 (+)
Gene ID: Rep_623_c_15_60
Type: pfam
Location: 60994 - 61368 (-)
Gene ID: Rep_623_c_15_61
Type: pfam
Location: 61529 - 62119 (+)
Gene ID: Rep_623_c_15_62
Type: TC
Location: 62419 - 63753 (+)
Gene ID: Rep_623_c_15_63
Type: pfam
Location: 64840 - 65721 (+)
Gene ID: Rep_623_c_15_64
Type: STP
Location: 65821 - 67812 (+)
Gene ID: Rep_623_c_15_65
Type: TC
Location: 67840 - 69210 (+)
Gene ID: Rep_623_c_15_66
Type: CAZyme
Location: 69355 - 70500 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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