dbCAN HGM

Cluster: Rep_621_CGC7

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_621_c_4	Rep_621_c_4_12	11879	13060	+	GT4
pfam	Rep_621_c_4	Rep_621_c_4_13	13057	14133	+	Radical_SAM \| SPASM
pfam	Rep_621_c_4	Rep_621_c_4_14	14136	15137	+	Acyl_transf_3
CAZyme	Rep_621_c_4	Rep_621_c_4_15	15142	16242	+	GT4
pfam	Rep_621_c_4	Rep_621_c_4_16	16253	16744	-	tRNA_edit
TC	Rep_621_c_4	Rep_621_c_4_17	16834	19347	+	1.B.14.6.14
pfam	Rep_621_c_4	Rep_621_c_4_18	19411	20067	+	Hydrolase \| HAD \| HAD_2
TC	Rep_621_c_4	Rep_621_c_4_19	20403	20768	+	2.A.7.34.6

Gene ID: Rep_621_c_4_12
Type: CAZyme
Location: 11879 - 13060 (+)

Gene ID: Rep_621_c_4_13
Type: pfam
Location: 13057 - 14133 (+)

Gene ID: Rep_621_c_4_14
Type: pfam
Location: 14136 - 15137 (+)

Gene ID: Rep_621_c_4_15
Type: CAZyme
Location: 15142 - 16242 (+)

Gene ID: Rep_621_c_4_16
Type: pfam
Location: 16253 - 16744 (-)

Gene ID: Rep_621_c_4_17
Type: TC
Location: 16834 - 19347 (+)

Gene ID: Rep_621_c_4_18
Type: pfam
Location: 19411 - 20067 (+)

Gene ID: Rep_621_c_4_19
Type: TC
Location: 20403 - 20768 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_621_c_4_12	vegan > omnivore	2.24612	0.00029

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_621_c_4_13	vegan > flexitarian	3.26279	0.03016
Rep_621_c_4_15	omnivore > flexitarian	1.13461	0.00455

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_621_c_4_13	nonIBD > CD	2.49614	0.03745
Rep_621_c_4_14	nonIBD > CD	1.35533	0.03745
Rep_621_c_4_14	nonIBD > UC	2.06893	0.00180
Rep_621_c_4_15	nonIBD > UC	1.56504	0.00180
Rep_621_c_4_16	nonIBD > UC	1.68490	0.00180
Rep_621_c_4_17	nonIBD > UC	1.11263	0.00180