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Cluster: Rep_621_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_621_c_49 Rep_621_c_49_75 89100 90596 + GT80
pfam Rep_621_c_49 Rep_621_c_49_76 90839 91384 - Hydrolase_3
pfam Rep_621_c_49 Rep_621_c_49_77 91360 92133 - F420_oxidored | DUF2520
TC Rep_621_c_49 Rep_621_c_49_78 92150 93454 - 9.B.126.2.2
pfam Rep_621_c_49 Rep_621_c_49_79 93534 94724 - Cons_hypoth95 | Methyltransf_25 | Thump_like
TC Rep_621_c_49 Rep_621_c_49_80 94682 96160 - 3.A.11.1.3
NULL(UNKNOWN) Rep_621_c_49 Rep_621_c_49_81 96197 96664 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_621_c_49 Rep_621_c_49_82 96657 97082 - 1.E.19.1.15
Gene ID: Rep_621_c_49_75
Type: CAZyme
Location: 89100 - 90596 (+)
Gene ID: Rep_621_c_49_76
Type: pfam
Location: 90839 - 91384 (-)
Gene ID: Rep_621_c_49_77
Type: pfam
Location: 91360 - 92133 (-)
Gene ID: Rep_621_c_49_78
Type: TC
Location: 92150 - 93454 (-)
Gene ID: Rep_621_c_49_79
Type: pfam
Location: 93534 - 94724 (-)
Gene ID: Rep_621_c_49_80
Type: TC
Location: 94682 - 96160 (-)
Gene ID: Rep_621_c_49_81
Type:
Location: 96197 - 96664 (-)
Gene ID: Rep_621_c_49_82
Type: TC
Location: 96657 - 97082 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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