dbCAN HGM

Cluster: Rep_621_CGC28

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_621_c_29	Rep_621_c_29_64	83468	86848	+	1.B.14.6.13
TC	Rep_621_c_29	Rep_621_c_29_65	86857	88461	+	8.A.46.2.2
pfam	Rep_621_c_29	Rep_621_c_29_66	88487	89629	+	GH18_BT1044-like
pfam	Rep_621_c_29	Rep_621_c_29_67	89638	90813	+	BT_3987-like_N \| Laminin_G_3
CAZyme	Rep_621_c_29	Rep_621_c_29_68	90841	92295	+	GH18
pfam	Rep_621_c_29	Rep_621_c_29_69	92378	93844	+	BACON \| BACON \| BACON_2 \| BACON_2
pfam	Rep_621_c_29	Rep_621_c_29_70	94068	95366	+	MFS_1 \| MFS_1
CAZyme	Rep_621_c_29	Rep_621_c_29_71	95368	96375	+	GH130_2
CAZyme	Rep_621_c_29	Rep_621_c_29_72	96375	98648	+	GH92
CAZyme	Rep_621_c_29	Rep_621_c_29_73	98665	100884	+	GH92
CAZyme	Rep_621_c_29	Rep_621_c_29_74	100897	103215	+	GH92

Gene ID: Rep_621_c_29_64
Type: TC
Location: 83468 - 86848 (+)

Gene ID: Rep_621_c_29_65
Type: TC
Location: 86857 - 88461 (+)

Gene ID: Rep_621_c_29_66
Type: pfam
Location: 88487 - 89629 (+)

Gene ID: Rep_621_c_29_67
Type: pfam
Location: 89638 - 90813 (+)

Gene ID: Rep_621_c_29_68
Type: CAZyme
Location: 90841 - 92295 (+)

Gene ID: Rep_621_c_29_69
Type: pfam
Location: 92378 - 93844 (+)

Gene ID: Rep_621_c_29_70
Type: pfam
Location: 94068 - 95366 (+)

Gene ID: Rep_621_c_29_71
Type: CAZyme
Location: 95368 - 96375 (+)

Gene ID: Rep_621_c_29_72
Type: CAZyme
Location: 96375 - 98648 (+)

Gene ID: Rep_621_c_29_73
Type: CAZyme
Location: 98665 - 100884 (+)

Gene ID: Rep_621_c_29_74
Type: CAZyme
Location: 100897 - 103215 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_621_c_29_66	omnivore > vegan	1.17268	0.03486
Rep_621_c_29_67	omnivore > vegan	1.21789	0.03523
Rep_621_c_29_68	omnivore > vegan	1.07949	0.03486
Rep_621_c_29_70	omnivore > vegan	1.03729	0.03486