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Cluster: Rep_621_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_621_c_28 Rep_621_c_28_23 25697 28771 + 1.B.14.6.1
TC Rep_621_c_28 Rep_621_c_28_24 28826 30385 + 8.A.46.1.3
NULL(UNKNOWN) Rep_621_c_28 Rep_621_c_28_25 30400 32982 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_621_c_28 Rep_621_c_28_26 32994 35846 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_621_c_28 Rep_621_c_28_27 35892 39005 + GH106
CAZyme Rep_621_c_28 Rep_621_c_28_28 39072 42524 + GH106
CAZyme Rep_621_c_28 Rep_621_c_28_29 42532 43941 + CE20
TC Rep_621_c_28 Rep_621_c_28_30 44096 45757 + 2.A.21.5.1
Gene ID: Rep_621_c_28_23
Type: TC
Location: 25697 - 28771 (+)
Gene ID: Rep_621_c_28_24
Type: TC
Location: 28826 - 30385 (+)
Gene ID: Rep_621_c_28_25
Type:
Location: 30400 - 32982 (+)
Gene ID: Rep_621_c_28_26
Type:
Location: 32994 - 35846 (+)
Gene ID: Rep_621_c_28_27
Type: CAZyme
Location: 35892 - 39005 (+)
Gene ID: Rep_621_c_28_28
Type: CAZyme
Location: 39072 - 42524 (+)
Gene ID: Rep_621_c_28_29
Type: CAZyme
Location: 42532 - 43941 (+)
Gene ID: Rep_621_c_28_30
Type: TC
Location: 44096 - 45757 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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