Cluster: Rep_621_CGC23
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_621
- CGC Family ID: CGCFAM_03400
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_621_c_23 | Rep_621_c_23_35 | 49833 | 50846 | - | GT2 |
| pfam | Rep_621_c_23 | Rep_621_c_23_36 | 50833 | 51753 | - | Lip_A_acyltrans |
| TC | Rep_621_c_23 | Rep_621_c_23_37 | 51765 | 53144 | - | 9.B.145.1.2 |
| pfam | Rep_621_c_23 | Rep_621_c_23_38 | 53155 | 53862 | - | TP_methylase |
| NULL(UNKNOWN) | Rep_621_c_23 | Rep_621_c_23_39 | 53867 | 55330 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_621_c_23 | Rep_621_c_23_40 | 55486 | 57120 | - | GH20 |
| sulfatase | Rep_621_c_23 | Rep_621_c_23_41 | 57205 | 58026 | - | S1_7 |
| pfam | Rep_621_c_23 | Rep_621_c_23_42 | 58034 | 59017 | - | Metallophos |
| CAZyme | Rep_621_c_23 | Rep_621_c_23_43 | 59054 | 60667 | - | GH63 |
| pfam | Rep_621_c_23 | Rep_621_c_23_44 | 60678 | 62609 | - | Alk_phosphatase | Metalloenzyme |
| sulfatase | Rep_621_c_23 | Rep_621_c_23_45 | 62621 | 63463 | - | S1_14 |
| CAZyme | Rep_621_c_23 | Rep_621_c_23_46 | 63475 | 66387 | - | GH92 |
| NULL(UNKNOWN) | Rep_621_c_23 | Rep_621_c_23_47 | 66745 | 67335 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_621_c_23 | Rep_621_c_23_48 | 67433 | 67873 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_621_c_23 | Rep_621_c_23_49 | 68031 | 70028 | + | GH97 |
Gene ID: Rep_621_c_23_35
Type: CAZyme
Location: 49833 - 50846 (-)
Type: CAZyme
Location: 49833 - 50846 (-)
Gene ID: Rep_621_c_23_36
Type: pfam
Location: 50833 - 51753 (-)
Type: pfam
Location: 50833 - 51753 (-)
Gene ID: Rep_621_c_23_37
Type: TC
Location: 51765 - 53144 (-)
Type: TC
Location: 51765 - 53144 (-)
Gene ID: Rep_621_c_23_38
Type: pfam
Location: 53155 - 53862 (-)
Type: pfam
Location: 53155 - 53862 (-)
Gene ID: Rep_621_c_23_39
Type:
Location: 53867 - 55330 (-)
Type:
Location: 53867 - 55330 (-)
Gene ID: Rep_621_c_23_40
Type: CAZyme
Location: 55486 - 57120 (-)
Type: CAZyme
Location: 55486 - 57120 (-)
Gene ID: Rep_621_c_23_41
Type: sulfatase
Location: 57205 - 58026 (-)
Type: sulfatase
Location: 57205 - 58026 (-)
Gene ID: Rep_621_c_23_42
Type: pfam
Location: 58034 - 59017 (-)
Type: pfam
Location: 58034 - 59017 (-)
Gene ID: Rep_621_c_23_43
Type: CAZyme
Location: 59054 - 60667 (-)
Type: CAZyme
Location: 59054 - 60667 (-)
Gene ID: Rep_621_c_23_44
Type: pfam
Location: 60678 - 62609 (-)
Type: pfam
Location: 60678 - 62609 (-)
Gene ID: Rep_621_c_23_45
Type: sulfatase
Location: 62621 - 63463 (-)
Type: sulfatase
Location: 62621 - 63463 (-)
Gene ID: Rep_621_c_23_46
Type: CAZyme
Location: 63475 - 66387 (-)
Type: CAZyme
Location: 63475 - 66387 (-)
Gene ID: Rep_621_c_23_47
Type:
Location: 66745 - 67335 (-)
Type:
Location: 66745 - 67335 (-)
Gene ID: Rep_621_c_23_48
Type: TF
Location: 67433 - 67873 (+)
Type: TF
Location: 67433 - 67873 (+)
Gene ID: Rep_621_c_23_49
Type: CAZyme
Location: 68031 - 70028 (+)
Type: CAZyme
Location: 68031 - 70028 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.