dbCAN Logo

Cluster: Rep_618_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_618_c_0 Rep_618_c_0_417 520633 523686 + GH2
pfam Rep_618_c_0 Rep_618_c_0_418 523699 524727 + Cons_hypoth95 | Methyltrans_SAM
NULL(UNKNOWN) Rep_618_c_0 Rep_618_c_0_419 524740 525027 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_618_c_0 Rep_618_c_0_420 525098 525670 - 2.A.51.1.6
TC Rep_618_c_0 Rep_618_c_0_421 525667 526209 - 2.A.51.1.6
TC Rep_618_c_0 Rep_618_c_0_422 526212 526976 - 3.D.1.4.1
TC Rep_618_c_0 Rep_618_c_0_423 526988 528499 - 3.D.1.9.3
TC Rep_618_c_0 Rep_618_c_0_424 528496 529896 - 3.D.1.9.1
NULL(UNKNOWN) Rep_618_c_0 Rep_618_c_0_425 529901 530530 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_618_c_0 Rep_618_c_0_426 530527 531441 - 3.D.1.9.3
TC Rep_618_c_0 Rep_618_c_0_427 531444 533429 - 3.D.1.9.1
Gene ID: Rep_618_c_0_417
Type: CAZyme
Location: 520633 - 523686 (+)
Gene ID: Rep_618_c_0_418
Type: pfam
Location: 523699 - 524727 (+)
Gene ID: Rep_618_c_0_419
Type:
Location: 524740 - 525027 (+)
Gene ID: Rep_618_c_0_420
Type: TC
Location: 525098 - 525670 (-)
Gene ID: Rep_618_c_0_421
Type: TC
Location: 525667 - 526209 (-)
Gene ID: Rep_618_c_0_422
Type: TC
Location: 526212 - 526976 (-)
Gene ID: Rep_618_c_0_423
Type: TC
Location: 526988 - 528499 (-)
Gene ID: Rep_618_c_0_424
Type: TC
Location: 528496 - 529896 (-)
Gene ID: Rep_618_c_0_425
Type:
Location: 529901 - 530530 (-)
Gene ID: Rep_618_c_0_426
Type: TC
Location: 530527 - 531441 (-)
Gene ID: Rep_618_c_0_427
Type: TC
Location: 531444 - 533429 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List