dbCAN Logo

Cluster: Rep_618_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_618_c_2 Rep_618_c_2_1354 1543294 1544223 + GT80
pfam Rep_618_c_2 Rep_618_c_2_1355 1544369 1544914 - Hydrolase_3
pfam Rep_618_c_2 Rep_618_c_2_1356 1544890 1545669 - F420_oxidored | DUF2520
TC Rep_618_c_2 Rep_618_c_2_1357 1545689 1546993 - 9.B.126.2.2
pfam Rep_618_c_2 Rep_618_c_2_1358 1547068 1548216 - Cons_hypoth95 | tRNA_U5-meth_tr | Methyltransf_25 | Thump_like
TC Rep_618_c_2 Rep_618_c_2_1359 1548213 1549691 - 3.A.11.1.3
NULL(UNKNOWN) Rep_618_c_2 Rep_618_c_2_1360 1549783 1550184 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_618_c_2 Rep_618_c_2_1361 1550177 1550602 - 1.E.19.1.15
Gene ID: Rep_618_c_2_1354
Type: CAZyme
Location: 1543294 - 1544223 (+)
Gene ID: Rep_618_c_2_1355
Type: pfam
Location: 1544369 - 1544914 (-)
Gene ID: Rep_618_c_2_1356
Type: pfam
Location: 1544890 - 1545669 (-)
Gene ID: Rep_618_c_2_1357
Type: TC
Location: 1545689 - 1546993 (-)
Gene ID: Rep_618_c_2_1358
Type: pfam
Location: 1547068 - 1548216 (-)
Gene ID: Rep_618_c_2_1359
Type: TC
Location: 1548213 - 1549691 (-)
Gene ID: Rep_618_c_2_1360
Type:
Location: 1549783 - 1550184 (-)
Gene ID: Rep_618_c_2_1361
Type: TC
Location: 1550177 - 1550602 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List