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Cluster: Rep_618_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_618_c_2 Rep_618_c_2_526 615612 616487 + 2.A.5.5.5
TC Rep_618_c_2 Rep_618_c_2_527 616491 617444 + 2.A.19.5.2
STP Rep_618_c_2 Rep_618_c_2_528 617525 618562 - HhH-GPD
pfam Rep_618_c_2 Rep_618_c_2_529 618643 618942 + Acetyltransf_CG
CAZyme Rep_618_c_2 Rep_618_c_2_530 619061 620467 - CE20
Gene ID: Rep_618_c_2_526
Type: TC
Location: 615612 - 616487 (+)
Gene ID: Rep_618_c_2_527
Type: TC
Location: 616491 - 617444 (+)
Gene ID: Rep_618_c_2_528
Type: STP
Location: 617525 - 618562 (-)
Gene ID: Rep_618_c_2_529
Type: pfam
Location: 618643 - 618942 (+)
Gene ID: Rep_618_c_2_530
Type: CAZyme
Location: 619061 - 620467 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_618_c_2_529 vegan > omnivore 1.41945 0.00139
Rep_618_c_2_530 vegan > omnivore 1.19726 0.00139

🧭 Explore Read Mapping of CGC

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