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Cluster: Rep_618_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_618_c_0 Rep_618_c_0_820 983304 985067 + GT4
STP Rep_618_c_0 Rep_618_c_0_821 985222 985632 + Glyoxalase
TC Rep_618_c_0 Rep_618_c_0_822 985808 987370 + 3.B.1.1.2
pfam Rep_618_c_0 Rep_618_c_0_823 987372 987821 + OAD_gamma
pfam Rep_618_c_0 Rep_618_c_0_824 987971 988426 + Biotin_lipoyl | Biotin_lipoyl_2
TC Rep_618_c_0 Rep_618_c_0_825 988431 989606 + 3.B.1.1.3
Gene ID: Rep_618_c_0_820
Type: CAZyme
Location: 983304 - 985067 (+)
Gene ID: Rep_618_c_0_821
Type: STP
Location: 985222 - 985632 (+)
Gene ID: Rep_618_c_0_822
Type: TC
Location: 985808 - 987370 (+)
Gene ID: Rep_618_c_0_823
Type: pfam
Location: 987372 - 987821 (+)
Gene ID: Rep_618_c_0_824
Type: pfam
Location: 987971 - 988426 (+)
Gene ID: Rep_618_c_0_825
Type: TC
Location: 988431 - 989606 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_618_c_0_823 vegan > omnivore 2.03007 0.00139
Rep_618_c_0_823 vegetarian > omnivore 1.66127 0.00229
Rep_618_c_0_824 vegan > omnivore 1.44888 0.00139
Rep_618_c_0_824 vegetarian > omnivore 1.06575 0.00229

🧭 Explore Read Mapping of CGC

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