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Cluster: Rep_618_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_618_c_0 Rep_618_c_0_34 33884 35635 - GH110
NULL(UNKNOWN) Rep_618_c_0 Rep_618_c_0_35 35650 37698 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_618_c_0 Rep_618_c_0_36 37706 38671 - S09.B04
CAZyme Rep_618_c_0 Rep_618_c_0_37 38655 40478 - GH110
CAZyme Rep_618_c_0 Rep_618_c_0_38 40468 42333 - GH110
NULL(UNKNOWN) Rep_618_c_0 Rep_618_c_0_39 42333 43478 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_618_c_0 Rep_618_c_0_40 43509 45092 - 8.A.46.1.3
TC Rep_618_c_0 Rep_618_c_0_41 45106 48237 - 1.B.14.6.1
Gene ID: Rep_618_c_0_34
Type: CAZyme
Location: 33884 - 35635 (-)
Gene ID: Rep_618_c_0_35
Type:
Location: 35650 - 37698 (-)
Gene ID: Rep_618_c_0_36
Type: peptidase
Location: 37706 - 38671 (-)
Gene ID: Rep_618_c_0_37
Type: CAZyme
Location: 38655 - 40478 (-)
Gene ID: Rep_618_c_0_38
Type: CAZyme
Location: 40468 - 42333 (-)
Gene ID: Rep_618_c_0_39
Type:
Location: 42333 - 43478 (-)
Gene ID: Rep_618_c_0_40
Type: TC
Location: 43509 - 45092 (-)
Gene ID: Rep_618_c_0_41
Type: TC
Location: 45106 - 48237 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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