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Cluster: Rep_604_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_604_c_1 Rep_604_c_1_426 499001 501181 + 3.A.25.2.1
pfam Rep_604_c_1 Rep_604_c_1_427 501212 502075 + CTP_transf_1
pfam Rep_604_c_1 Rep_604_c_1_428 502138 502806 + PS_Dcarbxylase
TC Rep_604_c_1 Rep_604_c_1_429 503219 504301 + 2.A.86.1.8
pfam Rep_604_c_1 Rep_604_c_1_430 504366 504812 + Flavokinase
pfam Rep_604_c_1 Rep_604_c_1_431 504881 505462 + AhpC-TSA | Redoxin | Thioredoxin_8
TC Rep_604_c_1 Rep_604_c_1_432 505665 506441 + 2.A.79.2.1
pfam Rep_604_c_1 Rep_604_c_1_433 506438 506959 + ThrE_2
pfam Rep_604_c_1 Rep_604_c_1_434 506961 507620 + DUF6064
CAZyme Rep_604_c_1 Rep_604_c_1_435 507823 509472 + CBM93 | GH33
CAZyme Rep_604_c_1 Rep_604_c_1_436 509530 510681 - GH88
Gene ID: Rep_604_c_1_426
Type: TC
Location: 499001 - 501181 (+)
Gene ID: Rep_604_c_1_427
Type: pfam
Location: 501212 - 502075 (+)
Gene ID: Rep_604_c_1_428
Type: pfam
Location: 502138 - 502806 (+)
Gene ID: Rep_604_c_1_429
Type: TC
Location: 503219 - 504301 (+)
Gene ID: Rep_604_c_1_430
Type: pfam
Location: 504366 - 504812 (+)
Gene ID: Rep_604_c_1_431
Type: pfam
Location: 504881 - 505462 (+)
Gene ID: Rep_604_c_1_432
Type: TC
Location: 505665 - 506441 (+)
Gene ID: Rep_604_c_1_433
Type: pfam
Location: 506438 - 506959 (+)
Gene ID: Rep_604_c_1_434
Type: pfam
Location: 506961 - 507620 (+)
Gene ID: Rep_604_c_1_435
Type: CAZyme
Location: 507823 - 509472 (+)
Gene ID: Rep_604_c_1_436
Type: CAZyme
Location: 509530 - 510681 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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