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Cluster: Rep_604_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_604_c_1 Rep_604_c_1_70 72004 75393 - GH146
TF Rep_604_c_1 Rep_604_c_1_71 75701 76615 + HTH_AraC
STP Rep_604_c_1 Rep_604_c_1_72 76732 78060 - PALP
CAZyme Rep_604_c_1 Rep_604_c_1_73 78339 79754 - GH109
CAZyme Rep_604_c_1 Rep_604_c_1_74 79776 81494 - GH20
TF Rep_604_c_1 Rep_604_c_1_75 81726 82502 + 0040266
NULL(UNKNOWN) Rep_604_c_1 Rep_604_c_1_76 82521 84290 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_604_c_1 Rep_604_c_1_77 84351 87611 + 9.A.25.1.1
Gene ID: Rep_604_c_1_70
Type: CAZyme
Location: 72004 - 75393 (-)
Gene ID: Rep_604_c_1_71
Type: TF
Location: 75701 - 76615 (+)
Gene ID: Rep_604_c_1_72
Type: STP
Location: 76732 - 78060 (-)
Gene ID: Rep_604_c_1_73
Type: CAZyme
Location: 78339 - 79754 (-)
Gene ID: Rep_604_c_1_74
Type: CAZyme
Location: 79776 - 81494 (-)
Gene ID: Rep_604_c_1_75
Type: TF
Location: 81726 - 82502 (+)
Gene ID: Rep_604_c_1_76
Type:
Location: 82521 - 84290 (+)
Gene ID: Rep_604_c_1_77
Type: TC
Location: 84351 - 87611 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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