dbCAN HGM

Cluster: Rep_597_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_597_c_0	Rep_597_c_0_537	637457	638179	-	1.B.42.1.2
TC	Rep_597_c_0	Rep_597_c_0_538	638290	640482	+	2.A.16.2.2
pfam	Rep_597_c_0	Rep_597_c_0_539	640696	641481	+	RrnaAD \| Methyltransf_25
CAZyme	Rep_597_c_0	Rep_597_c_0_540	641757	644645	+	CBM67 \| GH78
pfam	Rep_597_c_0	Rep_597_c_0_541	644842	645735	+	Big_14
TC	Rep_597_c_0	Rep_597_c_0_542	646246	648222	+	2.A.67.4.2
peptidase	Rep_597_c_0	Rep_597_c_0_543	648446	649675	+	M20.003
TF	Rep_597_c_0	Rep_597_c_0_544	649953	650360	+	Rrf2
TC	Rep_597_c_0	Rep_597_c_0_545	650803	652314	+	2.A.21.3.7

Gene ID: Rep_597_c_0_537
Type: TC
Location: 637457 - 638179 (-)

Gene ID: Rep_597_c_0_538
Type: TC
Location: 638290 - 640482 (+)

Gene ID: Rep_597_c_0_539
Type: pfam
Location: 640696 - 641481 (+)

Gene ID: Rep_597_c_0_540
Type: CAZyme
Location: 641757 - 644645 (+)

Gene ID: Rep_597_c_0_541
Type: pfam
Location: 644842 - 645735 (+)

Gene ID: Rep_597_c_0_542
Type: TC
Location: 646246 - 648222 (+)

Gene ID: Rep_597_c_0_543
Type: peptidase
Location: 648446 - 649675 (+)

Gene ID: Rep_597_c_0_544
Type: TF
Location: 649953 - 650360 (+)

Gene ID: Rep_597_c_0_545
Type: TC
Location: 650803 - 652314 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_597_c_0_539	vegan > omnivore	1.25036	0.00863
Rep_597_c_0_539	vegetarian > omnivore	1.86801	0.00250
Rep_597_c_0_540	vegetarian > omnivore	1.08413	0.00250
Rep_597_c_0_541	vegetarian > omnivore	1.39518	0.00250
Rep_597_c_0_544	vegan > omnivore	1.31975	0.00863
Rep_597_c_0_544	vegetarian > omnivore	1.71564	0.00250

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_597_c_0_538	nonIBD > UC	1.06022	0.00878