Cluster: Rep_597_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_597
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_597_c_0 | Rep_597_c_0_1606 | 1953776 | 1954609 | - | 2.A.64.3.2 |
| pfam | Rep_597_c_0 | Rep_597_c_0_1607 | 1954679 | 1954909 | - | TatA_B_E |
| CAZyme | Rep_597_c_0 | Rep_597_c_0_1608 | 1955595 | 1958369 | - | CBM67 | GH78 |
Gene ID: Rep_597_c_0_1606
Type: TC
Location: 1953776 - 1954609 (-)
Type: TC
Location: 1953776 - 1954609 (-)
Gene ID: Rep_597_c_0_1607
Type: pfam
Location: 1954679 - 1954909 (-)
Type: pfam
Location: 1954679 - 1954909 (-)
Gene ID: Rep_597_c_0_1608
Type: CAZyme
Location: 1955595 - 1958369 (-)
Type: CAZyme
Location: 1955595 - 1958369 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_597_c_0_1608 | vegetarian > omnivore | 1.11287 | 0.00250 |