dbCAN HGM

Cluster: Rep_597_CGC3

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_597_c_0	Rep_597_c_0_303	346878	349154	+	2.A.37.1.5
pfam	Rep_597_c_0	Rep_597_c_0_304	349266	350714	+	Mur_ligase \| Mur_ligase_C \| Mur_ligase_M
pfam	Rep_597_c_0	Rep_597_c_0_305	350732	352297	+	PQQ_2
TC	Rep_597_c_0	Rep_597_c_0_306	352538	353560	+	9.B.146.1.3
pfam	Rep_597_c_0	Rep_597_c_0_307	353563	354909	+	Mur_ligase_C \| Mur_ligase_M \| MurD_N \| MurD-like_N
TC	Rep_597_c_0	Rep_597_c_0_308	355187	356482	+	2.A.103.1.3
CAZyme	Rep_597_c_0	Rep_597_c_0_309	356650	357783	+	GT28

Gene ID: Rep_597_c_0_303
Type: TC
Location: 346878 - 349154 (+)

Gene ID: Rep_597_c_0_304
Type: pfam
Location: 349266 - 350714 (+)

Gene ID: Rep_597_c_0_305
Type: pfam
Location: 350732 - 352297 (+)

Gene ID: Rep_597_c_0_306
Type: TC
Location: 352538 - 353560 (+)

Gene ID: Rep_597_c_0_307
Type: pfam
Location: 353563 - 354909 (+)

Gene ID: Rep_597_c_0_308
Type: TC
Location: 355187 - 356482 (+)

Gene ID: Rep_597_c_0_309
Type: CAZyme
Location: 356650 - 357783 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_597_c_0_303	vegan > omnivore	1.11266	0.00863
Rep_597_c_0_303	vegetarian > omnivore	1.35081	0.00250
Rep_597_c_0_307	vegetarian > omnivore	1.21222	0.00250
Rep_597_c_0_308	vegetarian > omnivore	1.37299	0.00250

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_597_c_0_306	nonIBD > UC	1.01665	0.00878