Cluster: Rep_597_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_597
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_597_c_0 | Rep_597_c_0_1292 | 1553751 | 1554758 | - | GT27 |
| pfam | Rep_597_c_0 | Rep_597_c_0_1293 | 1554755 | 1555696 | - | Lip_A_acyltrans |
| pfam | Rep_597_c_0 | Rep_597_c_0_1294 | 1555693 | 1556478 | - | Inositol_P |
| TC | Rep_597_c_0 | Rep_597_c_0_1295 | 1556483 | 1557826 | - | 9.B.145.1.2 |
Gene ID: Rep_597_c_0_1292
Type: CAZyme
Location: 1553751 - 1554758 (-)
Type: CAZyme
Location: 1553751 - 1554758 (-)
Gene ID: Rep_597_c_0_1293
Type: pfam
Location: 1554755 - 1555696 (-)
Type: pfam
Location: 1554755 - 1555696 (-)
Gene ID: Rep_597_c_0_1294
Type: pfam
Location: 1555693 - 1556478 (-)
Type: pfam
Location: 1555693 - 1556478 (-)
Gene ID: Rep_597_c_0_1295
Type: TC
Location: 1556483 - 1557826 (-)
Type: TC
Location: 1556483 - 1557826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_597_c_0_1294 | vegetarian > omnivore | 1.28798 | 0.00250 |