Cluster: Rep_597_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_597
- CGC Family ID: CGCFAM_01034
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_597_c_0 | Rep_597_c_0_258 | 286585 | 288384 | - | GH15 |
| CAZyme | Rep_597_c_0 | Rep_597_c_0_259 | 288398 | 290614 | - | GT20 |
| pfam | Rep_597_c_0 | Rep_597_c_0_260 | 290966 | 292270 | + | AA_kinase |
| NULL(UNKNOWN) | Rep_597_c_0 | Rep_597_c_0_261 | 292805 | 292900 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_597_c_0 | Rep_597_c_0_262 | 293021 | 294712 | + | 3.A.3.7.2 |
| TC | Rep_597_c_0 | Rep_597_c_0_263 | 294726 | 296765 | + | 3.A.3.7.2 |
Gene ID: Rep_597_c_0_258
Type: CAZyme
Location: 286585 - 288384 (-)
Type: CAZyme
Location: 286585 - 288384 (-)
Gene ID: Rep_597_c_0_259
Type: CAZyme
Location: 288398 - 290614 (-)
Type: CAZyme
Location: 288398 - 290614 (-)
Gene ID: Rep_597_c_0_260
Type: pfam
Location: 290966 - 292270 (+)
Type: pfam
Location: 290966 - 292270 (+)
Gene ID: Rep_597_c_0_261
Type:
Location: 292805 - 292900 (+)
Type:
Location: 292805 - 292900 (+)
Gene ID: Rep_597_c_0_262
Type: TC
Location: 293021 - 294712 (+)
Type: TC
Location: 293021 - 294712 (+)
Gene ID: Rep_597_c_0_263
Type: TC
Location: 294726 - 296765 (+)
Type: TC
Location: 294726 - 296765 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.