Cluster: Rep_597_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_597
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_597_c_0 | Rep_597_c_0_914 | 1075036 | 1076436 | - | 2.A.6.2.18 |
| TC | Rep_597_c_0 | Rep_597_c_0_915 | 1076433 | 1079561 | - | 2.A.6.2.22 |
| TC | Rep_597_c_0 | Rep_597_c_0_916 | 1079567 | 1080685 | - | 2.A.6.2.44 |
| NULL(UNKNOWN) | Rep_597_c_0 | Rep_597_c_0_917 | 1081645 | 1083132 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_597_c_0 | Rep_597_c_0_918 | 1083524 | 1085416 | - | GH127 |
| TC | Rep_597_c_0 | Rep_597_c_0_919 | 1085557 | 1086237 | - | 3.A.1.122.2 |
Gene ID: Rep_597_c_0_914
Type: TC
Location: 1075036 - 1076436 (-)
Type: TC
Location: 1075036 - 1076436 (-)
Gene ID: Rep_597_c_0_915
Type: TC
Location: 1076433 - 1079561 (-)
Type: TC
Location: 1076433 - 1079561 (-)
Gene ID: Rep_597_c_0_916
Type: TC
Location: 1079567 - 1080685 (-)
Type: TC
Location: 1079567 - 1080685 (-)
Gene ID: Rep_597_c_0_917
Type:
Location: 1081645 - 1083132 (+)
Type:
Location: 1081645 - 1083132 (+)
Gene ID: Rep_597_c_0_918
Type: CAZyme
Location: 1083524 - 1085416 (-)
Type: CAZyme
Location: 1083524 - 1085416 (-)
Gene ID: Rep_597_c_0_919
Type: TC
Location: 1085557 - 1086237 (-)
Type: TC
Location: 1085557 - 1086237 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_597_c_0_915 | vegetarian > omnivore | 1.00147 | 0.00250 |