Cluster: Rep_597_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_597
- CGC Family ID: CGCFAM_02861
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_597_c_0 | Rep_597_c_0_811 | 958657 | 960054 | + | GH175 |
| CAZyme | Rep_597_c_0 | Rep_597_c_0_812 | 960086 | 962548 | + | GH95 |
| TC | Rep_597_c_0 | Rep_597_c_0_813 | 963334 | 964395 | - | 3.A.5.1.1 |
| TC | Rep_597_c_0 | Rep_597_c_0_814 | 964395 | 966635 | - | 3.A.5.1.1 |
Gene ID: Rep_597_c_0_811
Type: CAZyme
Location: 958657 - 960054 (+)
Type: CAZyme
Location: 958657 - 960054 (+)
Gene ID: Rep_597_c_0_812
Type: CAZyme
Location: 960086 - 962548 (+)
Type: CAZyme
Location: 960086 - 962548 (+)
Gene ID: Rep_597_c_0_813
Type: TC
Location: 963334 - 964395 (-)
Type: TC
Location: 963334 - 964395 (-)
Gene ID: Rep_597_c_0_814
Type: TC
Location: 964395 - 966635 (-)
Type: TC
Location: 964395 - 966635 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.