Cluster: Rep_597_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_597
- CGC Family ID: CGCFAM_00975
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_597_c_0 | Rep_597_c_0_789 | 928297 | 929847 | - | 3.A.11.1.3 |
| peptidase | Rep_597_c_0 | Rep_597_c_0_790 | 930084 | 931808 | - | S16.UNW |
| CAZyme | Rep_597_c_0 | Rep_597_c_0_791 | 932016 | 934487 | - | GH78 |
Gene ID: Rep_597_c_0_789
Type: TC
Location: 928297 - 929847 (-)
Type: TC
Location: 928297 - 929847 (-)
Gene ID: Rep_597_c_0_790
Type: peptidase
Location: 930084 - 931808 (-)
Type: peptidase
Location: 930084 - 931808 (-)
Gene ID: Rep_597_c_0_791
Type: CAZyme
Location: 932016 - 934487 (-)
Type: CAZyme
Location: 932016 - 934487 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_597_c_0_789 | vegetarian > omnivore | 1.14002 | 0.00250 |
| Rep_597_c_0_791 | vegetarian > omnivore | 1.30745 | 0.00250 |