Cluster: Rep_597_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_597
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_597_c_0 | Rep_597_c_0_767 | 895810 | 897336 | - | 2.A.17.1.6 |
| CAZyme | Rep_597_c_0 | Rep_597_c_0_768 | 897467 | 899503 | + | GH13_8 |
| CAZyme | Rep_597_c_0 | Rep_597_c_0_769 | 899775 | 902372 | + | CBM57 | GH2 |
Gene ID: Rep_597_c_0_767
Type: TC
Location: 895810 - 897336 (-)
Type: TC
Location: 895810 - 897336 (-)
Gene ID: Rep_597_c_0_768
Type: CAZyme
Location: 897467 - 899503 (+)
Type: CAZyme
Location: 897467 - 899503 (+)
Gene ID: Rep_597_c_0_769
Type: CAZyme
Location: 899775 - 902372 (+)
Type: CAZyme
Location: 899775 - 902372 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_597_c_0_769 | vegetarian > omnivore | 1.17920 | 0.00250 |