Cluster: Rep_597_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_597
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_597_c_0 | Rep_597_c_0_688 | 805289 | 807079 | + | GH78 |
| pfam | Rep_597_c_0 | Rep_597_c_0_689 | 807386 | 808861 | + | FGGY_N | FGGY_C |
| pfam | Rep_597_c_0 | Rep_597_c_0_690 | 808944 | 810197 | + | RhaA |
| TC | Rep_597_c_0 | Rep_597_c_0_691 | 810289 | 811332 | + | 2.A.7.6.1 |
Gene ID: Rep_597_c_0_688
Type: CAZyme
Location: 805289 - 807079 (+)
Type: CAZyme
Location: 805289 - 807079 (+)
Gene ID: Rep_597_c_0_689
Type: pfam
Location: 807386 - 808861 (+)
Type: pfam
Location: 807386 - 808861 (+)
Gene ID: Rep_597_c_0_690
Type: pfam
Location: 808944 - 810197 (+)
Type: pfam
Location: 808944 - 810197 (+)
Gene ID: Rep_597_c_0_691
Type: TC
Location: 810289 - 811332 (+)
Type: TC
Location: 810289 - 811332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A ihumii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_597_c_0_689 | vegetarian > omnivore | 1.20391 | 0.00250 |