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Cluster: Rep_566_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_566_c_1 Rep_566_c_1_140 130735 131487 - 1.B.42.1.2
TC Rep_566_c_1 Rep_566_c_1_141 131619 132365 + 3.A.1.27.1
TC Rep_566_c_1 Rep_566_c_1_142 132369 133157 + 3.A.1.27.5
NULL(UNKNOWN) Rep_566_c_1 Rep_566_c_1_143 133257 135365 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_566_c_1 Rep_566_c_1_144 135413 138370 - GH106
TC Rep_566_c_1 Rep_566_c_1_145 138478 140265 - 8.A.46.1.6
TC Rep_566_c_1 Rep_566_c_1_146 140284 143622 - 1.B.14.6.1
Gene ID: Rep_566_c_1_140
Type: TC
Location: 130735 - 131487 (-)
Gene ID: Rep_566_c_1_141
Type: TC
Location: 131619 - 132365 (+)
Gene ID: Rep_566_c_1_142
Type: TC
Location: 132369 - 133157 (+)
Gene ID: Rep_566_c_1_143
Type:
Location: 133257 - 135365 (-)
Gene ID: Rep_566_c_1_144
Type: CAZyme
Location: 135413 - 138370 (-)
Gene ID: Rep_566_c_1_145
Type: TC
Location: 138478 - 140265 (-)
Gene ID: Rep_566_c_1_146
Type: TC
Location: 140284 - 143622 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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