PROTEIN: Rep_566_c_1_143
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Protein File & Metadata
Source:
Rep_566_c_1_143.pdb
Genome ID:
Protein ID:
Rep_566_c_1_143
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Detailed structural information will appear here after analysis...
Protein Sequence
MNIKRLIMIT SLFACCCAGM AGSNKIDRKA LVMRHNVTQT QIDKYSPLSV GNGRFCYTAD 60 ITGMQTFPEL YREGIPLSTM SEWGWHSFPN TENYQLSDVF KYVDAYDRKV PYPIGSSPGH 120 EYLRANPHQT GLALIGLLKA EGKTLSEDEL SEPRQQLNVW EGTLESRFKL SGSPVEITTL 180 CHPDKDELAY RLQSPLFSEK KLGVRICFPF PSVAFGKEPA VWDVEDGHRS WIIRSGENDW 240 VIKHQTDDFV YCCRIRTSVK AALRETSRHS YFLELLSDKD EFTLLVDFST DENTLDTSDD 300 YASAVRANKQ AWETFWMSGG VVDLSESKDH RWKELERRIV LSQYLTAIQS RQQYPPQETG 360 LTCNSWYGKF HLEMHWWHSV HFALWGRSAY LSNTLDWYDD ILEVAKSYAA TQGYKGVRWP 420 KMIGPGGVEA PSGVGPLLVW QQPHPIFYAE LLYRENPTEE TLNRFGSLID ATAEFMYDYA 480 HWDASRKCYV LGPPIISARE GNSGTFRENI NPAFELAYWS WGLKKANDWR ERMGRKRNAD 540 WDRMADQMAP WPVINGVYVE AESVLEKDGG HPTQLAAYGF LPASAYLDKE VMRKTLRHVL 600 DNWDWTETWG WDYPLIAMTA IRLNEPEWAL EALLKNVQKN TYLPNGHNFQ NEGLPLYLPG 660 NGGLLTVVAM MCAGWDGCQE ENPGFPKNGQ WNVRWEGLKP TF 702
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1D2X6-F1-model_v4 | 2 | 702 | 2 | 703 | 0.9353 |
0.9429 |
| AF-A0A175VVL5-F1-model_v4 | 20 | 702 | 13 | 701 | 0.9209 |
0.9508 |
| AF-U7PKL5-F1-model_v4 | 22 | 702 | 22 | 733 | 0.8944 |
0.9464 |
| AF-Q8DN23-F1-model_v4 | 33 | 702 | 1 | 709 | 0.7594 |
0.8373 |
| AF-Q8DNW5-F1-model_v4 | 24 | 702 | 1 | 734 | 0.7567 |
0.8428 |
| AF-A0A132ZDE7-F1-model_v4 | 33 | 702 | 1 | 708 | 0.7563 |
0.8148 |
| AF-K0ERA7-F1-model_v4 | 32 | 702 | 10 | 746 | 0.7549 |
0.839 |
| AF-U7PSZ4-F1-model_v4 | 30 | 702 | 23 | 719 | 0.7513 |
0.8379 |
| AF-P9WN13-F1-model_v4 | 32 | 702 | 9 | 745 | 0.7513 |
0.8374 |
| AF-A0A0D2EYV5-F1-model_v4 | 30 | 702 | 3 | 713 | 0.7495 |
0.8279 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCW30860.1 | GH43_17 | 21 | 702 | 303 | 1038 | 0.79 |
0.972 |
| AF-A0A7G1IS17-F1-model_v4 | GH95 | 22 | 701 | 1 | 733 | 0.7836 |
0.8372 |
| A0A2K2FHU9 | GH95 | 26 | 702 | 2 | 716 | 0.7805 |
0.8369 |
| AF-A0A4P8KEA5-F1-model_v4 | GH65 | 33 | 701 | 1 | 695 | 0.7774 |
0.8313 |
| AF-A0A387BKY9-F1-model_v4 | GH65 | 30 | 700 | 1 | 647 | 0.7757 |
0.8254 |
| AF-A0A4Y6UZU2-F1-model_v4 | GH95 | 30 | 702 | 1 | 742 | 0.7737 |
0.8527 |
| AF-A0A7R7X9W7-F1-model_v4 | GH95 | 30 | 702 | 1 | 703 | 0.7729 |
0.8195 |
| AF-E4Q4M2-F1-model_v4 | GH95 | 27 | 702 | 1 | 698 | 0.7711 |
0.8371 |
| AF-A0A089JXL0-F1-model_v4 | GH95 | 27 | 702 | 1 | 698 | 0.771 |
0.8352 |
| AF-A0A6P1TS79-F1-model_v4 | GH95 | 33 | 702 | 1 | 699 | 0.7703 |
0.8408 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A917DS75 | GH65 | 22 | 701 | 1 | 666 | 0.8111 |
0.8435 |
| F0R347 | GH65 | 21 | 700 | 14 | 670 | 0.8026 |
0.8514 |
| QZT38678.1 | GH65 | 27 | 698 | 24 | 672 | 0.8013 |
0.8563 |
| UOH78939.1 | GH65 | 29 | 700 | 14 | 667 | 0.8007 |
0.8506 |
| A0A412CKD5 | GH65 | 31 | 701 | 23 | 682 | 0.7965 |
0.8453 |
| A0A3S9P3R6 | GH65 | 30 | 701 | 21 | 674 | 0.7954 |
0.8489 |
| UKB83162.1 | GH65 | 32 | 700 | 25 | 664 | 0.7951 |
0.8595 |
| WGK64939.1 | GH65 | 30 | 700 | 32 | 685 | 0.7908 |
0.8489 |
| BCW30860.1 | GH43_17 | 21 | 702 | 303 | 1038 | 0.79 |
0.972 |
| E0S367 | GH95 | 33 | 702 | 1 | 695 | 0.7856 |
0.8394 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7fe3-assembly1.cif.gz_A | 32 | 700 | 2 | 653 | 0.8051 |
0.8485 |
| 7kmq-assembly1.cif.gz_B | 25 | 702 | 1 | 698 | 0.7625 |
0.8267 |
| 7kmq-assembly1.cif.gz_A | 26 | 702 | 1 | 697 | 0.7617 |
0.8268 |
| 3wiq-assembly1.cif.gz_A-2 | 29 | 702 | 2 | 748 | 0.7603 |
0.8266 |
| 1h54-assembly1.cif.gz_A | 32 | 701 | 7 | 740 | 0.7515 |
0.8235 |
| 6w0p-assembly1.cif.gz_A | 32 | 702 | 11 | 736 | 0.7473 |
0.8178 |
| 1h54-assembly1.cif.gz_B | 32 | 701 | 7 | 742 | 0.746 |
0.8192 |
| 4ktp-assembly1.cif.gz_B | 31 | 702 | 10 | 744 | 0.7415 |
0.8136 |
| 4ktr-assembly4.cif.gz_H | 31 | 702 | 10 | 744 | 0.741 |
0.8132 |
| 4ufc-assembly1.cif.gz_A | 34 | 702 | 1 | 747 | 0.7372 |
0.8251 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CID5-F1-model_v4 | 30 | 702 | 1 | 750 | 0.7631 |
0.8398 |
| AF-Q8L164-F1-model_v4 | 32 | 702 | 12 | 760 | 0.7627 |
0.8447 |
| AF-Q8GRC3-F1-model_v4 | 31 | 702 | 1 | 744 | 0.7611 |
0.8372 |
| AF-A9KM56-F1-model_v4 | 31 | 702 | 4 | 740 | 0.755 |
0.8258 |
| AF-O06993-F1-model_v4 | 32 | 701 | 9 | 738 | 0.7529 |
0.8273 |
| AF-P9WN13-F1-model_v4 | 32 | 702 | 9 | 745 | 0.7513 |
0.8374 |
| AF-A2R797-F1-model_v4 | 27 | 702 | 16 | 748 | 0.7504 |
0.8348 |
| AF-Q8RBL8-F1-model_v4 | 29 | 702 | 10 | 763 | 0.7496 |
0.825 |
| AF-Q49736-F1-model_v4 | 32 | 702 | 9 | 745 | 0.7485 |
0.8372 |
| AF-Q8L163-F1-model_v4 | 29 | 702 | 13 | 766 | 0.7483 |
0.8255 |