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Cluster: Rep_556_CGC93

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_556_c_76 Rep_556_c_76_19 19713 20927 - GT4
NULL(UNKNOWN) Rep_556_c_76 Rep_556_c_76_20 20953 21096 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_556_c_76 Rep_556_c_76_21 21077 22204 + GH33
CAZyme Rep_556_c_76 Rep_556_c_76_22 22282 23022 + GT26
NULL(UNKNOWN) Rep_556_c_76 Rep_556_c_76_23 23017 24234 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_556_c_76 Rep_556_c_76_24 24287 25342 - GT4
pfam Rep_556_c_76 Rep_556_c_76_25 25326 25940 - Hexapep | Hexapep_2
NULL(UNKNOWN) Rep_556_c_76 Rep_556_c_76_26 26426 26605 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_556_c_76 Rep_556_c_76_27 26618 29122 - 9.A.8.1.6
Gene ID: Rep_556_c_76_19
Type: CAZyme
Location: 19713 - 20927 (-)
Gene ID: Rep_556_c_76_20
Type:
Location: 20953 - 21096 (+)
Gene ID: Rep_556_c_76_21
Type: CAZyme
Location: 21077 - 22204 (+)
Gene ID: Rep_556_c_76_22
Type: CAZyme
Location: 22282 - 23022 (+)
Gene ID: Rep_556_c_76_23
Type:
Location: 23017 - 24234 (-)
Gene ID: Rep_556_c_76_24
Type: CAZyme
Location: 24287 - 25342 (-)
Gene ID: Rep_556_c_76_25
Type: pfam
Location: 25326 - 25940 (-)
Gene ID: Rep_556_c_76_26
Type:
Location: 26426 - 26605 (-)
Gene ID: Rep_556_c_76_27
Type: TC
Location: 26618 - 29122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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