PROTEIN: Rep_556_c_76_23
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Protein File & Metadata
Source:
Rep_556_c_76_23.pdb
Genome ID:
Protein ID:
Rep_556_c_76_23
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Protein Sequence
MIQDFVNRHF YSLFIITLIF GIVTYGLIGF QSIDELCAVV LFVMFIHYMF HTSDWRINKI 60 FIYILGIFIF YLIYSLQISS NSKTAILVDF IIQLKPYIAF FCVYQIKPLF SKKQNTLLNQ 120 LCLLCWGVLV PFGIISLFYP NILEFIAGHP SNYASAIAAL ALVYLYTSNN TNKEKIIFIC 180 MLAVGLFSAR SKFYGFFVLA TFTILFFSNA KNLKFNFRNS IITLIMLGII LLVAKEKIEL 240 YFLQGISTNS EKDYIARFAL YATSFQIFKD YFPFGSGLAT FGTHASGAYY SDIYKEYEID 300 GIWGLSKHYP YFISDTYYPS LAQFGVVGAL LFAIFWIYLC KKAYTYFKKT YDSKLTTIVI 360 VVSGYFAIEN IADATFTSNR GLFFMMFLGL VFSNMTHNMN QKETL 405
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 1 | 405 | 1 | 508 | 0.5962 |
0.75 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 1 | 405 | 2 | 508 | 0.5951 |
0.7502 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 7 | 405 | 1 | 500 | 0.5908 |
0.7524 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 2 | 405 | 18 | 451 | 0.5771 |
0.7586 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 405 | 19 | 564 | 0.5611 |
0.7425 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 1 | 405 | 5 | 515 | 0.5919 |
0.7476 |
| A0A517MXC4 | GT26 | 2 | 405 | 18 | 451 | 0.5771 |
0.7586 |
| D5MJ04 | GT9 | 1 | 405 | 19 | 564 | 0.5611 |
0.7425 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7tpj-assembly1.cif.gz_B | 1 | 401 | 1 | 403 | 0.7007 |
0.7319 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.