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Cluster: Rep_555_CGC99

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_73 Rep_555_c_73_3 1196 2524 - 3.A.1.11.8
TC Rep_555_c_73 Rep_555_c_73_4 2545 3333 - 3.A.1.11.8
TC Rep_555_c_73 Rep_555_c_73_5 3330 4103 - 3.A.1.11.8
TC Rep_555_c_73 Rep_555_c_73_6 4142 5512 - 3.A.1.11.8
TC Rep_555_c_73 Rep_555_c_73_7 5652 6842 - 2.A.40.1.4
pfam Rep_555_c_73 Rep_555_c_73_8 6907 7413 + PMSR
CAZyme Rep_555_c_73 Rep_555_c_73_9 7491 8426 - GT2
Gene ID: Rep_555_c_73_3
Type: TC
Location: 1196 - 2524 (-)
Gene ID: Rep_555_c_73_4
Type: TC
Location: 2545 - 3333 (-)
Gene ID: Rep_555_c_73_5
Type: TC
Location: 3330 - 4103 (-)
Gene ID: Rep_555_c_73_6
Type: TC
Location: 4142 - 5512 (-)
Gene ID: Rep_555_c_73_7
Type: TC
Location: 5652 - 6842 (-)
Gene ID: Rep_555_c_73_8
Type: pfam
Location: 6907 - 7413 (+)
Gene ID: Rep_555_c_73_9
Type: CAZyme
Location: 7491 - 8426 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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