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Cluster: Rep_555_CGC95

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_64 Rep_555_c_64_11 14704 15369 - 1.A.8.3.1
peptidase Rep_555_c_64 Rep_555_c_64_12 15502 18768 + S41.UPB
NULL(UNKNOWN) Rep_555_c_64 Rep_555_c_64_13 18855 19451 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_555_c_64 Rep_555_c_64_14 19488 20114 - 2.A.124.1.4
TC Rep_555_c_64 Rep_555_c_64_15 20111 20461 - 2.A.124.1.2
NULL(UNKNOWN) Rep_555_c_64 Rep_555_c_64_16 20512 20847 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_555_c_64 Rep_555_c_64_17 20866 21120 - Sigma70_r2
CAZyme Rep_555_c_64 Rep_555_c_64_18 21289 23544 + GH92
Gene ID: Rep_555_c_64_11
Type: TC
Location: 14704 - 15369 (-)
Gene ID: Rep_555_c_64_12
Type: peptidase
Location: 15502 - 18768 (+)
Gene ID: Rep_555_c_64_13
Type:
Location: 18855 - 19451 (-)
Gene ID: Rep_555_c_64_14
Type: TC
Location: 19488 - 20114 (-)
Gene ID: Rep_555_c_64_15
Type: TC
Location: 20111 - 20461 (-)
Gene ID: Rep_555_c_64_16
Type:
Location: 20512 - 20847 (-)
Gene ID: Rep_555_c_64_17
Type: STP
Location: 20866 - 21120 (-)
Gene ID: Rep_555_c_64_18
Type: CAZyme
Location: 21289 - 23544 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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