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Cluster: Rep_555_CGC91

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_555_c_59 Rep_555_c_59_1 1 531 - GH120
pfam Rep_555_c_59 Rep_555_c_59_2 733 1428 - DUF3823
pfam Rep_555_c_59 Rep_555_c_59_3 1447 3222 - SusD_RagB | SusD-like_3
TC Rep_555_c_59 Rep_555_c_59_4 3242 6631 - 1.B.14.6.1
STP Rep_555_c_59 Rep_555_c_59_5 6806 7837 - FecR
STP Rep_555_c_59 Rep_555_c_59_6 7879 8454 - Sigma70_r2 | Sigma70_r4_2
CAZyme Rep_555_c_59 Rep_555_c_59_7 8609 11032 - GH3
CAZyme Rep_555_c_59 Rep_555_c_59_8 11051 13390 - GH92
CAZyme Rep_555_c_59 Rep_555_c_59_9 13520 15631 - GH141
CAZyme Rep_555_c_59 Rep_555_c_59_10 15735 17633 - GH97
TC Rep_555_c_59 Rep_555_c_59_11 17740 19449 - 8.A.46.1.6
TC Rep_555_c_59 Rep_555_c_59_12 19462 22773 - 1.B.14.6.1
Gene ID: Rep_555_c_59_1
Type: CAZyme
Location: 1 - 531 (-)
Gene ID: Rep_555_c_59_2
Type: pfam
Location: 733 - 1428 (-)
Gene ID: Rep_555_c_59_3
Type: pfam
Location: 1447 - 3222 (-)
Gene ID: Rep_555_c_59_4
Type: TC
Location: 3242 - 6631 (-)
Gene ID: Rep_555_c_59_5
Type: STP
Location: 6806 - 7837 (-)
Gene ID: Rep_555_c_59_6
Type: STP
Location: 7879 - 8454 (-)
Gene ID: Rep_555_c_59_7
Type: CAZyme
Location: 8609 - 11032 (-)
Gene ID: Rep_555_c_59_8
Type: CAZyme
Location: 11051 - 13390 (-)
Gene ID: Rep_555_c_59_9
Type: CAZyme
Location: 13520 - 15631 (-)
Gene ID: Rep_555_c_59_10
Type: CAZyme
Location: 15735 - 17633 (-)
Gene ID: Rep_555_c_59_11
Type: TC
Location: 17740 - 19449 (-)
Gene ID: Rep_555_c_59_12
Type: TC
Location: 19462 - 22773 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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