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Cluster: Rep_555_CGC75

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_31 Rep_555_c_31_19 27295 30600 + 1.B.14.6.1
TC Rep_555_c_31 Rep_555_c_31_20 30625 32160 + 8.A.46.1.4
pfam Rep_555_c_31 Rep_555_c_31_21 32407 33324 + DHDPS
pfam Rep_555_c_31 Rep_555_c_31_22 33331 34533 + GlcNAc_2-epim
TC Rep_555_c_31 Rep_555_c_31_23 34582 35826 + 2.A.1.14.14
CAZyme Rep_555_c_31 Rep_555_c_31_24 35943 37565 + CBM93 | GH33
CAZyme Rep_555_c_31 Rep_555_c_31_25 37572 39581 + GH20
CAZyme Rep_555_c_31 Rep_555_c_31_26 39604 41709 + CE20
Gene ID: Rep_555_c_31_19
Type: TC
Location: 27295 - 30600 (+)
Gene ID: Rep_555_c_31_20
Type: TC
Location: 30625 - 32160 (+)
Gene ID: Rep_555_c_31_21
Type: pfam
Location: 32407 - 33324 (+)
Gene ID: Rep_555_c_31_22
Type: pfam
Location: 33331 - 34533 (+)
Gene ID: Rep_555_c_31_23
Type: TC
Location: 34582 - 35826 (+)
Gene ID: Rep_555_c_31_24
Type: CAZyme
Location: 35943 - 37565 (+)
Gene ID: Rep_555_c_31_25
Type: CAZyme
Location: 37572 - 39581 (+)
Gene ID: Rep_555_c_31_26
Type: CAZyme
Location: 39604 - 41709 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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