dbCAN Logo

Cluster: Rep_555_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_555_c_24 Rep_555_c_24_12 13383 15518 - GH89
CAZyme Rep_555_c_24 Rep_555_c_24_13 15524 16903 - GH27
TC Rep_555_c_24 Rep_555_c_24_14 16996 18534 - 8.A.46.1.5
TC Rep_555_c_24 Rep_555_c_24_15 18555 21818 - 1.B.14.6.1
STP Rep_555_c_24 Rep_555_c_24_16 22042 23061 - FecR
TC Rep_555_c_24 Rep_555_c_24_17 23166 24767 - 8.A.46.2.2
TC Rep_555_c_24 Rep_555_c_24_18 24783 27887 - 1.B.14.6.13
CAZyme Rep_555_c_24 Rep_555_c_24_19 27981 29099 - GH43_24
pfam Rep_555_c_24 Rep_555_c_24_20 29216 31237 - SusD_RagB | SusD-like_3
TC Rep_555_c_24 Rep_555_c_24_21 31251 34499 - 1.B.14.6.1
Gene ID: Rep_555_c_24_12
Type: CAZyme
Location: 13383 - 15518 (-)
Gene ID: Rep_555_c_24_13
Type: CAZyme
Location: 15524 - 16903 (-)
Gene ID: Rep_555_c_24_14
Type: TC
Location: 16996 - 18534 (-)
Gene ID: Rep_555_c_24_15
Type: TC
Location: 18555 - 21818 (-)
Gene ID: Rep_555_c_24_16
Type: STP
Location: 22042 - 23061 (-)
Gene ID: Rep_555_c_24_17
Type: TC
Location: 23166 - 24767 (-)
Gene ID: Rep_555_c_24_18
Type: TC
Location: 24783 - 27887 (-)
Gene ID: Rep_555_c_24_19
Type: CAZyme
Location: 27981 - 29099 (-)
Gene ID: Rep_555_c_24_20
Type: pfam
Location: 29216 - 31237 (-)
Gene ID: Rep_555_c_24_21
Type: TC
Location: 31251 - 34499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List