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Cluster: Rep_555_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_555_c_13 Rep_555_c_13_57 73238 74215 - GT10
CAZyme Rep_555_c_13 Rep_555_c_13_58 74271 75161 - GT8
CAZyme Rep_555_c_13 Rep_555_c_13_59 75169 76161 - GT100
pfam Rep_555_c_13 Rep_555_c_13_60 76169 76855 - CTP_transf_3
CAZyme Rep_555_c_13 Rep_555_c_13_61 77138 78223 - GT82
CAZyme Rep_555_c_13 Rep_555_c_13_62 78228 79130 - GT2
pfam Rep_555_c_13 Rep_555_c_13_63 79167 79409 - DUF4248
CAZyme Rep_555_c_13 Rep_555_c_13_64 79716 80498 - GT25
TC Rep_555_c_13 Rep_555_c_13_65 80501 82240 - 3.A.1.106.15
pfam Rep_555_c_13 Rep_555_c_13_66 82240 83424 - Wzy_C
CAZyme Rep_555_c_13 Rep_555_c_13_67 83427 84467 - GT4
TC Rep_555_c_13 Rep_555_c_13_68 84495 85667 - 9.B.146.1.4
Gene ID: Rep_555_c_13_57
Type: CAZyme
Location: 73238 - 74215 (-)
Gene ID: Rep_555_c_13_58
Type: CAZyme
Location: 74271 - 75161 (-)
Gene ID: Rep_555_c_13_59
Type: CAZyme
Location: 75169 - 76161 (-)
Gene ID: Rep_555_c_13_60
Type: pfam
Location: 76169 - 76855 (-)
Gene ID: Rep_555_c_13_61
Type: CAZyme
Location: 77138 - 78223 (-)
Gene ID: Rep_555_c_13_62
Type: CAZyme
Location: 78228 - 79130 (-)
Gene ID: Rep_555_c_13_63
Type: pfam
Location: 79167 - 79409 (-)
Gene ID: Rep_555_c_13_64
Type: CAZyme
Location: 79716 - 80498 (-)
Gene ID: Rep_555_c_13_65
Type: TC
Location: 80501 - 82240 (-)
Gene ID: Rep_555_c_13_66
Type: pfam
Location: 82240 - 83424 (-)
Gene ID: Rep_555_c_13_67
Type: CAZyme
Location: 83427 - 84467 (-)
Gene ID: Rep_555_c_13_68
Type: TC
Location: 84495 - 85667 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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