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Cluster: Rep_555_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_13 Rep_555_c_13_36 49442 51703 + 2.A.37.1.8
pfam Rep_555_c_13 Rep_555_c_13_37 51734 52492 + CTP_transf_3 | NTP_transf_3
pfam Rep_555_c_13 Rep_555_c_13_38 52473 53306 - DUF6057
TC Rep_555_c_13 Rep_555_c_13_39 53580 55475 - 2.A.9.3.5
peptidase Rep_555_c_13 Rep_555_c_13_40 55487 57091 - C26.964
CAZyme Rep_555_c_13 Rep_555_c_13_41 57205 58173 - GT2
CAZyme Rep_555_c_13 Rep_555_c_13_42 58203 59012 - GT2
Gene ID: Rep_555_c_13_36
Type: TC
Location: 49442 - 51703 (+)
Gene ID: Rep_555_c_13_37
Type: pfam
Location: 51734 - 52492 (+)
Gene ID: Rep_555_c_13_38
Type: pfam
Location: 52473 - 53306 (-)
Gene ID: Rep_555_c_13_39
Type: TC
Location: 53580 - 55475 (-)
Gene ID: Rep_555_c_13_40
Type: peptidase
Location: 55487 - 57091 (-)
Gene ID: Rep_555_c_13_41
Type: CAZyme
Location: 57205 - 58173 (-)
Gene ID: Rep_555_c_13_42
Type: CAZyme
Location: 58203 - 59012 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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