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Cluster: Rep_555_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_10 Rep_555_c_10_54 69437 70534 + 3.D.7.2.3
TC Rep_555_c_10 Rep_555_c_10_55 70547 72268 + 3.D.7.2.3
TC Rep_555_c_10 Rep_555_c_10_56 72280 73020 + 3.D.7.2.3
peptidase Rep_555_c_10 Rep_555_c_10_57 73147 73602 + A31.UPW
NULL(UNKNOWN) Rep_555_c_10 Rep_555_c_10_58 73639 73851 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_555_c_10 Rep_555_c_10_59 73910 74647 - 1.A.8.2.9
pfam Rep_555_c_10 Rep_555_c_10_60 74672 76183 - FGGY_N | FGGY_C
STP Rep_555_c_10 Rep_555_c_10_61 76220 77782 - Pyr_redox_2
CAZyme Rep_555_c_10 Rep_555_c_10_62 77869 80214 - GT51
TC Rep_555_c_10 Rep_555_c_10_63 80257 81198 - 2.A.98.1.4
Gene ID: Rep_555_c_10_54
Type: TC
Location: 69437 - 70534 (+)
Gene ID: Rep_555_c_10_55
Type: TC
Location: 70547 - 72268 (+)
Gene ID: Rep_555_c_10_56
Type: TC
Location: 72280 - 73020 (+)
Gene ID: Rep_555_c_10_57
Type: peptidase
Location: 73147 - 73602 (+)
Gene ID: Rep_555_c_10_58
Type:
Location: 73639 - 73851 (-)
Gene ID: Rep_555_c_10_59
Type: TC
Location: 73910 - 74647 (-)
Gene ID: Rep_555_c_10_60
Type: pfam
Location: 74672 - 76183 (-)
Gene ID: Rep_555_c_10_61
Type: STP
Location: 76220 - 77782 (-)
Gene ID: Rep_555_c_10_62
Type: CAZyme
Location: 77869 - 80214 (-)
Gene ID: Rep_555_c_10_63
Type: TC
Location: 80257 - 81198 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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