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Cluster: Rep_555_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_555_c_2 Rep_555_c_2_81 131055 134489 + 1.B.14.6.1
pfam Rep_555_c_2 Rep_555_c_2_82 134508 136220 + SusD_RagB | SusD-like_3
CAZyme Rep_555_c_2 Rep_555_c_2_83 136279 138429 + GH31_14
CAZyme Rep_555_c_2 Rep_555_c_2_84 138626 140602 + GH97
CAZyme Rep_555_c_2 Rep_555_c_2_85 140674 143445 + GH92
CAZyme Rep_555_c_2 Rep_555_c_2_86 143527 146355 + CBM51
NULL(UNKNOWN) Rep_555_c_2 Rep_555_c_2_87 146628 147023 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_555_c_2 Rep_555_c_2_88 147525 150692 + 1.B.14.6.1
pfam Rep_555_c_2 Rep_555_c_2_89 150724 152280 + SusD_RagB | SusD-like | SusD-like_2 | SusD-like_3
pfam Rep_555_c_2 Rep_555_c_2_90 152355 153845 + Arylsulfotrans | Arylsulfotran_2
TC Rep_555_c_2 Rep_555_c_2_91 153847 155025 + 2.A.51.1.3
Gene ID: Rep_555_c_2_81
Type: TC
Location: 131055 - 134489 (+)
Gene ID: Rep_555_c_2_82
Type: pfam
Location: 134508 - 136220 (+)
Gene ID: Rep_555_c_2_83
Type: CAZyme
Location: 136279 - 138429 (+)
Gene ID: Rep_555_c_2_84
Type: CAZyme
Location: 138626 - 140602 (+)
Gene ID: Rep_555_c_2_85
Type: CAZyme
Location: 140674 - 143445 (+)
Gene ID: Rep_555_c_2_86
Type: CAZyme
Location: 143527 - 146355 (+)
Gene ID: Rep_555_c_2_87
Type:
Location: 146628 - 147023 (+)
Gene ID: Rep_555_c_2_88
Type: TC
Location: 147525 - 150692 (+)
Gene ID: Rep_555_c_2_89
Type: pfam
Location: 150724 - 152280 (+)
Gene ID: Rep_555_c_2_90
Type: pfam
Location: 152355 - 153845 (+)
Gene ID: Rep_555_c_2_91
Type: TC
Location: 153847 - 155025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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