Cluster: Rep_555_CGC104
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_555
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_555_c_82 | Rep_555_c_82_10 | 8074 | 9288 | + | 9.B.146.1.4 |
| CAZyme | Rep_555_c_82 | Rep_555_c_82_11 | 9248 | 10321 | + | GT2 |
| pfam | Rep_555_c_82 | Rep_555_c_82_12 | 10318 | 11517 | + | Wzy_C |
| TC | Rep_555_c_82 | Rep_555_c_82_13 | 11514 | 13238 | + | 3.A.1.106.15 |
| NULL(UNKNOWN) | Rep_555_c_82 | Rep_555_c_82_14 | 13284 | 13553 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_555_c_82 | Rep_555_c_82_15 | 13602 | 14048 | - | GH73 |
Gene ID: Rep_555_c_82_10
Type: TC
Location: 8074 - 9288 (+)
Type: TC
Location: 8074 - 9288 (+)
Gene ID: Rep_555_c_82_11
Type: CAZyme
Location: 9248 - 10321 (+)
Type: CAZyme
Location: 9248 - 10321 (+)
Gene ID: Rep_555_c_82_12
Type: pfam
Location: 10318 - 11517 (+)
Type: pfam
Location: 10318 - 11517 (+)
Gene ID: Rep_555_c_82_13
Type: TC
Location: 11514 - 13238 (+)
Type: TC
Location: 11514 - 13238 (+)
Gene ID: Rep_555_c_82_14
Type:
Location: 13284 - 13553 (-)
Type:
Location: 13284 - 13553 (-)
Gene ID: Rep_555_c_82_15
Type: CAZyme
Location: 13602 - 14048 (-)
Type: CAZyme
Location: 13602 - 14048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp905196875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.