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Cluster: Rep_555_CGC103

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_555_c_81 Rep_555_c_81_9 7469 8455 + GH43_34
STP Rep_555_c_81 Rep_555_c_81_10 8606 9247 + TetR_N
pfam Rep_555_c_81 Rep_555_c_81_11 9256 10545 + OEP | OEP
TC Rep_555_c_81 Rep_555_c_81_12 10574 11476 + 3.A.1.105.16
TC Rep_555_c_81 Rep_555_c_81_13 11500 12402 + 3.A.1.105.15
TC Rep_555_c_81 Rep_555_c_81_14 12574 13308 + 3.A.1.105.15
pfam Rep_555_c_81 Rep_555_c_81_15 13332 13688 + 23S_rRNA_IVP
TC Rep_555_c_81 Rep_555_c_81_16 13688 14851 + 3.A.1.105.4
TC Rep_555_c_81 Rep_555_c_81_17 14861 15955 + 3.A.1.105.15
Gene ID: Rep_555_c_81_9
Type: CAZyme
Location: 7469 - 8455 (+)
Gene ID: Rep_555_c_81_10
Type: STP
Location: 8606 - 9247 (+)
Gene ID: Rep_555_c_81_11
Type: pfam
Location: 9256 - 10545 (+)
Gene ID: Rep_555_c_81_12
Type: TC
Location: 10574 - 11476 (+)
Gene ID: Rep_555_c_81_13
Type: TC
Location: 11500 - 12402 (+)
Gene ID: Rep_555_c_81_14
Type: TC
Location: 12574 - 13308 (+)
Gene ID: Rep_555_c_81_15
Type: pfam
Location: 13332 - 13688 (+)
Gene ID: Rep_555_c_81_16
Type: TC
Location: 13688 - 14851 (+)
Gene ID: Rep_555_c_81_17
Type: TC
Location: 14861 - 15955 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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